Table of Contents
I2b2 Video Tutorials (not specific to USF Health)
Please note that ontologies and source systems in USF's i2b2 instance will differ from the ones demonstrated in the i2b2 video tutorials available on youtube. An overview of the ontologies and source systems relevant to the USF system is available in the "USF i2b2 Instance Quick Summary" section.
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- Source systems:
- Allscripts (historical data only starting 01/01/2003)
- GE (historical data only starting 01/01/2003)
- EPIC
- List of ontologies and corresponding source systems:
| I2B2 Ontology | Source system(s) | Notes |
|---|---|---|
| Demographics | GE, EPIC | Patient records from both sources are merged (prevailing source system is EPIC; GE patient record is pulled only if no EPIC record exists) |
| Diagnoses | GE, EPIC | Billing data |
| Laboratory Tests | Allscripts, EPIC |
| Medications | Allscripts, EPIC |
| Problem List | GE, EPIC | Billing data |
| Procedures | GE, EPIC | Billing data |
| Providers | Allscripts, GE, EPIC | Provider records from all sources are merged (prevailing source system is EPIC >> GE >> Allscripts) |
| Smoking Status | Allscripts, EPIC | Allscripts and EPIC various smoking statuses are mapped to the following values: CURRENT |
| Visit Details | Allscripts, GE, EPIC |
| Vital Signs | Allscripts. EPIC |
GE and Allscripts I2B2 Data Extracts Summary
For details on Allscripts and GE data extract click on this link: Stage 1 I2B2 Data Extracts Summary/wiki/spaces/I2B2/pages/12262736062
TriNetX Video Tutorials (not specific to USF Health)
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TriNetX video tutorials are available within the application. Once you are logged into TriNetX application (https://live.trinetx.com/#/signin/) click "Help" link in the top right corner. The following list of short video tutorials are available:
TriNetX Video Tutorials (USF Health training recordings)
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